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  5. SymbC1.scaffold1520.5

SymbC1.scaffold1520.5 (1520.5)


Aliases : 1520.5

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0003194 (OrthoFinder) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1520.5
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1323.3 1323.3 EF-hand domain; Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold6244.1 6244.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 84 320
IPR002048 EF_hand_dom 341 407
No external refs found!