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  5. SymbC1.scaffold1504.2

SymbC1.scaffold1504.2 (1504.2)


Aliases : 1504.2

Description : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0003926 (OrthoFinder) Phylogenetic Tree(s): OG0003926_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1504.2
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4574.1 4574.1 Fibronectin type III; Filamin/ABP280 repeat-like; PA14... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 2496 2727
IPR011629 Cbl_biosynth_CobW-like_C 11 76
No external refs found!