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  5. Cpa|evm.model.tig00020510.27

Cpa|evm.model.tig00020510.27 (tig00020510_g9811.t1)


Aliases : tig00020510_g9811.t1

Description : Ethylene receptor 1 OS=Brassica oleracea


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020510.27
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
OT_01G06340.1 No alias Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
Sro1939_g306550.1 Contig1997.g17090 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Sro296_g110670.1 Contig440.g5906 Peroxide stress-activated histidine kinase mak2 0.02 OrthoFinder
SymbC1.scaffold18394.1 18394.1 PAS fold; Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 414 555
IPR003018 GAF 70 257
IPR003661 HisK_dim/P 293 357
No external refs found!