SymbC1.scaffold1323.3 (1323.3)

Aliases : 1323.3

Description : EF-hand domain; Ion transport domain [Interproscan].

Gene families : OG_01_0003194 (OrthoFinder) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1323.3
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold1520.5	1520.5	EF-hand domain; Ion transport domain [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold45.13	45.13	Ion transport domain [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000796	condensin complex	IEP	Enrichment
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Enrichment
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006772	thiamine metabolic process	IEP	Enrichment
BP	GO:0007076	mitotic chromosome condensation	IEP	Enrichment
BP	GO:0009228	thiamine biosynthetic process	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016778	diphosphotransferase activity	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	375	441
IPR005821	Ion_trans_dom	116	350

External Links

No external refs found!