SymbC1.scaffold1268.2 (1268.2)

Aliases : 1268.2

Description : Tyrosine-protein kinase ephrin type A/B receptor-like; ABC-type glycine betaine transport system, substrate-binding domain [Interproscan].

Gene families : OG_01_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1268.2
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold1124.6	1124.6	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold1809.5	1809.5	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.01	OrthoFinder
SymbC1.scaffold2225.3	2225.3	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.01	OrthoFinder
SymbC1.scaffold2266.6	2266.6	Hypothetical protein	0.02	OrthoFinder
SymbC1.scaffold3755.2	3755.2	Hypothetical protein	0.02	OrthoFinder
SymbC1.scaffold4014.6	4014.6	Tyrosine-protein kinase ephrin type A/B receptor-like...	0.05	OrthoFinder
SymbC1.scaffold629.10	629.10	ABC-type glycine betaine transport system,...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0098533	ATPase dependent transmembrane transport complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0015204	urea transmembrane transporter activity	IEP	Enrichment
BP	GO:0015840	urea transport	IEP	Enrichment
BP	GO:0019755	one-carbon compound transport	IEP	Enrichment
MF	GO:0042887	amide transmembrane transporter activity	IEP	Enrichment
BP	GO:0071918	urea transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007210	ABC_Gly_betaine_transp_sub-bd	296	402
IPR011641	Tyr-kin_ephrin_A/B_rcpt-like	490	538

External Links

No external refs found!

SymbC1.scaffold1268.2 (1268.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation