SymbC1.scaffold12563.1 (12563.1)


Aliases : 12563.1

Description : Hypothetical protein


Gene families : OG_01_0003557 (OrthoFinder) Phylogenetic Tree(s): OG0003557_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold12563.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.36 tig00021319_g20230.t1 Coiled-coil domain-containing protein 39... 0.01 OrthoFinder
Cre17.g701250 30782607, FAP59 Coiled-coil domain-containing protein 39... 0.02 OrthoFinder
Vocar.0004s0211.1 32889479 Hypothetical protein 0.03 OrthoFinder
XM_002505676.1 MICPUN_63554, 63554 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment

No InterPro domains available for this sequence

No external refs found!