SymbC1.scaffold1240.1 (1240.1)


Aliases : 1240.1

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1240.1

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1618.4 1618.4 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1779.3 1779.3 Hypothetical protein 0.07 OrthoFinder
SymbC1.scaffold2188.7 2188.7 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold4029.4 4029.4 Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7358.2 7358.2 EF-hand domain pair; Ion transport domain [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold8446.2 8446.2 Ion transport domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 72 282
No external refs found!