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  5. SymbC1.scaffold1187.3

SymbC1.scaffold1187.3 (1187.3)


Aliases : 1187.3

Description : C-5 cytosine methyltransferase [Interproscan].


Gene families : OG_01_0000169 (OrthoFinder) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1187.3
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold262.5 262.5 Ribonuclease H domain; Reverse transcriptase domain... 0.02 OrthoFinder
SymbC1.scaffold2667.8 2667.8 Reverse transcriptase domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold4890.1 4890.1 Reverse transcriptase domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7591.2 7591.2 C-5 cytosine methyltransferase; Reverse transcriptase... 0.04 OrthoFinder
SymbC1.scaffold874.6 874.6 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8956.2 8956.2 Reverse transcriptase domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 101 222
No external refs found!