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  5. SymbC1.scaffold1142.2

SymbC1.scaffold1142.2 (1142.2)


Aliases : 1142.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1142.2
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1467.2 1467.2 Cyclic nucleotide-binding domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold2457.3 2457.3 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002500883.1 MICPUN_56911, 56911 Voltage-gated ion channel superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 2 230
No external refs found!