SymbC1.scaffold113.56 (113.56)

Aliases : 113.56

Description : Glycosyl transferases group 1; Polysaccharide biosynthesis protein, C-terminal domain; Methyltransferase type 11; ABC transporter-like; Polysaccharide biosynthesis protein; Glycosyltransferase subfamily 4-like, N-terminal domain; Sulfotransferase domain; Branched-chain amino acid ATP-binding cassette transporter, C-terminal; Glycosyltransferase 2-like [Interproscan].

Gene families : OG_01_0005853 (OrthoFinder) Phylogenetic Tree(s): OG0005853_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold113.56
Cluster	HCCA: Cluster_83

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008146	sulfotransferase activity	IEA	Interproscan
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	None	Extended
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0008653	lipopolysaccharide metabolic process	IEP	Enrichment
BP	GO:0009103	lipopolysaccharide biosynthetic process	IEP	Enrichment
BP	GO:0009254	peptidoglycan turnover	IEP	Enrichment
MF	GO:0015002	obsolete heme-copper terminal oxidase activity	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Enrichment
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Enrichment
MF	GO:0070402	NADPH binding	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001173	Glyco_trans_2-like	270	378
IPR029303	Polysacc_synt_C	828	894
IPR003439	ABC_transporter-like_ATP-bd	19	175
IPR000863	Sulfotransferase_dom	904	1101
IPR013216	Methyltransf_11	1246	1336
IPR032823	BCA_ABC_TP_C	228	249
IPR028098	Glyco_trans_4-like_N	1420	1581
IPR002797	Polysacc_synth	553	793

External Links

No external refs found!

SymbC1.scaffold113.56 (113.56)

Expression Profile

Co-expression Networks

Functional Annotation