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  5. SymbC1.scaffold1129.3

SymbC1.scaffold1129.3 (1129.3)


Aliases : 1129.3

Description : EF-hand domain; Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1129.3
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold130.11 130.11 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold2850.2 2850.2 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold4029.4 4029.4 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold4701.2 4701.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 418 485
IPR005821 Ion_trans_dom 143 392
No external refs found!