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  5. SymbC1.scaffold1075.4

SymbC1.scaffold1075.4 (1075.4)


Aliases : 1075.4

Description : Oxoglutarate/iron-dependent dioxygenase; Non-haem dioxygenase N-terminal domain; Palmitoyltransferase, DHHC domain [Interproscan].


Gene families : OG_01_0000087 (OrthoFinder) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1075.4
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cz01g38320.t1 No alias Ankyrin repeat-containing domain; Palmitoyltransferase,... 0.02 OrthoFinder
Dusal.0035s00003.1 33196674 Palmitoyltransferase, DHHC domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498518.1_7471 KAA8498518 Putative palmitoyltransferase ZDHHC16 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 601 704
IPR026992 DIOX_N 425 512
IPR026992 DIOX_N 25 162
IPR001594 Palmitoyltrfase_DHHC 1007 1128
No external refs found!