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Aliases : 10744.1
Description : SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].
Gene families : OG_01_0000532 (OrthoFinder) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold10744.1 | |
| Cluster | HCCA: Cluster_166 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g45120.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz01g45130.t1 | No alias | SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_16G01630.1 | No alias | SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. | 0.01 | OrthoFinder | |
| Sro2022_g311530.1 | Contig3299.g25891 | Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a | 0.01 | OrthoFinder | |
| XM_003061244.1 | MicpuC2_45780, 45780 | SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | Enrichment |
| MF | GO:0005484 | SNAP receptor activity | IEP | Enrichment |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006749 | glutathione metabolic process | IEP | Enrichment |
| BP | GO:0006751 | glutathione catabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Enrichment |
| MF | GO:0016842 | amidine-lyase activity | IEP | Enrichment |
| MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | Enrichment |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Enrichment |
| BP | GO:0043171 | peptide catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044273 | sulfur compound catabolic process | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| MF | GO:0060090 | molecular adaptor activity | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001678 | MeTrfase_RsmB/NOP2 | 171 | 400 |
| No external refs found! |