1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold10275.2

SymbC1.scaffold10275.2 (10275.2)


Aliases : 10275.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold10275.2
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1495.1 1495.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold563.11 563.11 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold66.25 66.25 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6747.1 6747.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold7338.1 7338.1 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold8446.2 8446.2 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold945.1 945.1 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0098599 palmitoyl hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 236 391
No external refs found!