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  5. Cpa|evm.model.tig00001477.8

Cpa|evm.model.tig00001477.8 (tig00001477_g8900.t1)


Aliases : tig00001477_g8900.t1

No description available


Gene families : OG_01_0001172 (OrthoFinder) Phylogenetic Tree(s): OG0001172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001477.8
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.74 tig00000158_g10180.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000190.25 tig00000190_g13848.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000581.35 tig00000581_g2242.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000581.36 tig00000581_g2243.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00001098.1 tig00001098_g7051.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00021178.19 tig00021178_g19210.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021571.38 tig00021571_g22379.t1 No description available 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000157 TIR_dom 447 570
IPR002110 Ankyrin_rpt 144 178
No external refs found!