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  5. SymbC1.scaffold1.571

SymbC1.scaffold1.571 (1.571)


Aliases : 1.571

Description : Squalene cyclase, N-terminal; Domain of unknown function DUF3463; Radical SAM; Squalene cyclase, C-terminal [Interproscan].


Gene families : OG_01_0013545 (OrthoFinder) Phylogenetic Tree(s): OG0013545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.571
Cluster HCCA: Cluster_44


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 731 883
IPR032696 SQ_cyclase_C 344 427
IPR032696 SQ_cyclase_C 459 688
IPR032697 SQ_cyclase_N 41 332
IPR022563 DUF3463 892 1021
No external refs found!