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  5. SymbC1.scaffold1.516

SymbC1.scaffold1.516 (1.516)


Aliases : 1.516

Description : Planctomycete extracellular; Bacterial lipid A biosynthesis acyltransferase; Metallo-peptidase family M12B Reprolysin-like [Interproscan].


Gene families : OG_01_0000458 (OrthoFinder) Phylogenetic Tree(s): OG0000458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.516

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.2361 1.2361 Dockerin type I repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR004960 LipA_acyltrans 1125 1407
IPR011506 Planctomycete_extracellular 7 26
No external refs found!