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  5. SymbC1.scaffold1.1836

SymbC1.scaffold1.1836 (1.1836)


Aliases : 1.1836

Description : Flagellar basal body rod protein, N-terminal; Flagellar basal-body/hook protein, C-terminal domain [Interproscan].


Gene families : OG_01_0013533 (OrthoFinder) Phylogenetic Tree(s): OG0013533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1836
Cluster HCCA: Cluster_3


Type GO Term Name Evidence Source
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR001444 Flag_bb_rod_N 5 32
IPR010930 Flg_bb/hook_C_dom 82 136
No external refs found!