SymbC1.scaffold1.1715 (1.1715)

Aliases : 1.1715

Description : Delta-60 repeat; Concanavalin A-like lectin/glucanases superfamily; Lactonase, 7-bladed beta propeller; RTX calcium-binding nonapeptide repeat; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella; Bacterial Ig domain [Interproscan].

Gene families : OG_01_0005796 (OrthoFinder) Phylogenetic Tree(s): OG0005796_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1715
Cluster HCCA: Cluster_159

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001343 Hemolysn_Ca-bd 4142 4175
IPR001343 Hemolysn_Ca-bd 4980 4995
IPR001343 Hemolysn_Ca-bd 4231 4266
IPR001343 Hemolysn_Ca-bd 4369 4403
IPR001343 Hemolysn_Ca-bd 4078 4112
IPR001343 Hemolysn_Ca-bd 4301 4330
IPR001343 Hemolysn_Ca-bd 4042 4077
IPR001343 Hemolysn_Ca-bd 4597 4627
IPR001343 Hemolysn_Ca-bd 5947 5981
IPR001343 Hemolysn_Ca-bd 4521 4551
IPR001343 Hemolysn_Ca-bd 4653 4686
IPR001343 Hemolysn_Ca-bd 4335 4367
IPR001343 Hemolysn_Ca-bd 4468 4500
IPR001343 Hemolysn_Ca-bd 5757 5786
IPR001343 Hemolysn_Ca-bd 4179 4207
IPR001343 Hemolysn_Ca-bd 9101 9131
IPR001343 Hemolysn_Ca-bd 5175 5194
IPR001343 Hemolysn_Ca-bd 4927 4962
IPR013431 Delta_60_rpt 10780 10810
IPR013431 Delta_60_rpt 10964 11003
IPR013431 Delta_60_rpt 10665 10698
IPR013431 Delta_60_rpt 10906 10940
IPR013431 Delta_60_rpt 10721 10757
IPR019405 Lactonase_7-beta_prop 8135 8276
IPR019405 Lactonase_7-beta_prop 8284 8430
No external refs found!