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  5. SymbC1.scaffold1.1694

SymbC1.scaffold1.1694 (1.1694)


Aliases : 1.1694

Description : Bacterial Ig domain; RTX calcium-binding nonapeptide repeat [Interproscan].


Gene families : OG_01_0002000 (OrthoFinder) Phylogenetic Tree(s): OG0002000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


  • Expression Profiles
    • Type Description Actions
    Neighborhood HRR: SymbC1.scaffold1.1694
    Cluster HCCA: Cluster_206

    Target Alias Description ECC score Gene Family Method Actions
    SymbC1.scaffold1.1306 1.1306 RapA2, cadherin-like domain; Coagulation factor 5/8... 0.02 OrthoFinder
    SymbC1.scaffold1.784 1.784 Phage tail collar domain; RTX calcium-binding... 0.02 OrthoFinder

    Type GO Term Name Evidence Source
    MF GO:0005509 calcium ion binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0003725 double-stranded RNA binding IEP Enrichment
    MF GO:0003951 NAD+ kinase activity IEP Enrichment
    MF GO:0004040 amidase activity IEP Enrichment
    MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
    MF GO:0004672 protein kinase activity IEP Enrichment
    MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
    MF GO:0005524 ATP binding IEP Enrichment
    BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
    BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
    BP GO:0006464 cellular protein modification process IEP Enrichment
    BP GO:0006468 protein phosphorylation IEP Enrichment
    BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
    BP GO:0006739 NADP metabolic process IEP Enrichment
    BP GO:0006741 NADP biosynthetic process IEP Enrichment
    BP GO:0006766 vitamin metabolic process IEP Enrichment
    BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
    MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
    BP GO:0008614 pyridoxine metabolic process IEP Enrichment
    BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
    BP GO:0009110 vitamin biosynthetic process IEP Enrichment
    BP GO:0009112 nucleobase metabolic process IEP Enrichment
    BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
    CC GO:0009349 riboflavin synthase complex IEP Enrichment
    MF GO:0016301 kinase activity IEP Enrichment
    BP GO:0016310 phosphorylation IEP Enrichment
    MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
    MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
    MF GO:0016740 transferase activity IEP Enrichment
    MF GO:0016746 acyltransferase activity IEP Enrichment
    MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
    MF GO:0016829 lyase activity IEP Enrichment
    MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
    MF GO:0017076 purine nucleotide binding IEP Enrichment
    BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
    BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
    BP GO:0018214 protein carboxylation IEP Enrichment
    MF GO:0030554 adenyl nucleotide binding IEP Enrichment
    MF GO:0032553 ribonucleotide binding IEP Enrichment
    MF GO:0032555 purine ribonucleotide binding IEP Enrichment
    MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
    MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
    BP GO:0036211 protein modification process IEP Enrichment
    BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
    BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
    BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
    BP GO:0043412 macromolecule modification IEP Enrichment
    BP GO:0044281 small molecule metabolic process IEP Enrichment
    BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
    MF GO:0050897 cobalt ion binding IEP Enrichment
    MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
    BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
    BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
    MF GO:0097367 carbohydrate derivative binding IEP Enrichment
    BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
    InterPro domains Description Start Stop
    IPR001343 Hemolysn_Ca-bd 1179 1209
    IPR001343 Hemolysn_Ca-bd 1152 1178
    No external refs found!