SymbC1.scaffold1.1615 (1.1615)

Aliases : 1.1615

Description : NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Sugar isomerase (SIS); Glutamine amidotransferase domain; Oxidoreductase, N-terminal; DNA methylase N-4/N-6 [Interproscan].

Gene families : OG_01_0000914 (OrthoFinder) Phylogenetic Tree(s): OG0000914_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1.1615
Cluster	HCCA: Cluster_159

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010181	FMN binding	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0032259	methylation	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	IEA	Interproscan
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001347	SIS_dom	308	434
IPR001347	SIS_dom	480	608
IPR000683	Gfo/Idh/MocA-like_OxRdtase_N	1473	1589
IPR002941	DNA_methylase_N4/N6	656	909
IPR001155	OxRdtase_FMN_N	940	1172

External Links

No external refs found!

SymbC1.scaffold1.1615 (1.1615)

Expression Profile

Co-expression Networks

Functional Annotation