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  5. SymbC1.scaffold1.1581

SymbC1.scaffold1.1581 (1.1581)


Aliases : 1.1581

Description : Oxidoreductase, N-terminal; Sodium/solute symporter [Interproscan].


Gene families : OG_01_0006545 (OrthoFinder) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1581
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold16.127 16.127 DoxX family; Oxidoreductase, N-terminal [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold2.1870 2.1870 Domain of unknown function DUF1080; Oxidoreductase,... 0.04 OrthoFinder
SymbC1.scaffold2.1982 2.1982 Oxidoreductase, N-terminal [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000683 Gfo/Idh/MocA-like_OxRdtase_N 44 159
IPR001734 Na/solute_symporter 507 772
IPR001734 Na/solute_symporter 859 1010
No external refs found!