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  5. Cpa|evm.model.tig00001310.11

Cpa|evm.model.tig00001310.11 (tig00001310_g8161.t1)


Aliases : tig00001310_g8161.t1

No description available


Gene families : OG_01_0000873 (OrthoFinder) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001310.11
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre11.g480060 30775535 No description available 0.02 OrthoFinder
OT_02G02480.1 No alias Ribonuclease H domain; Exonuclease, RNase T/DNA... 0.05 OrthoFinder
OT_03G01160.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
PTI_11G02920.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
Sro246_g097710.1 Contig171.g1955 Interferon-stimulated 20 kDa exonuclease-like 2 0.07 OrthoFinder
TP22G01600.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59412.1_7034 PRW59412 RNA exonuclease 4 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 134 258
No external refs found!