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  5. Cpa|evm.model.tig00001254.15

Cpa|evm.model.tig00001254.15 (tig00001254_g7820.t1)


Aliases : tig00001254_g7820.t1

No description available


Gene families : OG_01_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001254.15
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Cre07.g330400 30774406, KCN1 No description available 0.02 OrthoFinder
Sro63_g035780.1 Contig2778.g22343 Gated channel subfamily B member 0.01 OrthoFinder
SymbC1.scaffold2884.7 2884.7 Ion transport domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold58.3 58.3 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold934.5 934.5 Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0019s0113.1 32892784 Ion transport domain [Interproscan]. 0.03 OrthoFinder
Vocar.0045s0030.1 32887805 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002503703.1 MICPUN_60381, 60381 Voltage-gated ion channel superfamily 0.01 OrthoFinder
XM_003059863.1 MicpuC2_59734, 59734 Voltage-gated ion channel superfamily 0.02 OrthoFinder
XM_003063127.1 MicpuC2_52954, 52954 Voltage-gated ion channel superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 39 271
No external refs found!