1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001214.14

Cpa|evm.model.tig00001214.14 (tig00001214_g7556.t1)


Aliases : tig00001214_g7556.t1

No description available


Gene families : OG_01_0000209 (OrthoFinder) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001214.14
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre01.g032139 30789087 WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD27141 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0008s0435.1 32897396 Zinc finger, C3HC4 RING-type [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498393.1_7346 KAA8498393 LON peptidase N-terminal domain and RING finger protein 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 566 613
No external refs found!