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  5. UNPLg00269.t1

UNPLg00269.t1


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: UNPLg00269.t1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000404.3 tig00000404_g369.t1 Photosynthesis.photorespiration.glycerate:glycolate transporter 0.02 OrthoFinder
Cpa|evm.model.tig00020801.76 tig00020801_g13957.t1 No description available 0.01 OrthoFinder
Dusal.0088s00001.1 33203555 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
EOD05330 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_003064470.1 MicpuC2_37010, 37010 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 47 110
IPR000408 Reg_chr_condens 114 165
No external refs found!