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  5. Cz19g01050.t1

Cz19g01050.t1


Description : Peptidase M3A/M3B catalytic domain [Interproscan].


Gene families : OG_01_0000375 (OrthoFinder) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz19g01050.t1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cz08g03120.t1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.03 OrthoFinder
OT_10G00160.1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.02 OrthoFinder
Sro155_g070570.1 Contig395.g5364 Oligopeptidase A 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61262.1_220 PRW61262 Putative cytosolic oligopeptidase A 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499330.1_8283 KAA8499330 Putative mitochondrial intermediate peptidase, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001567 Pept_M3A_M3B_dom 41 166
No external refs found!