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  5. Cz16g18210.t1

Cz16g18210.t1


Description : tRNA/rRNA methyltransferase, SpoU type [Interproscan].


Gene families : OG_01_0000900 (OrthoFinder) Phylogenetic Tree(s): OG0000900_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz16g18210.t1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold449.9 449.9 tRNA/rRNA methyltransferase, SpoU type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR001537 SpoU_MeTrfase 126 225
No external refs found!