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  5. Cpa|evm.model.tig00001127.26

Cpa|evm.model.tig00001127.26 (tig00001127_g7159.t1)


Aliases : tig00001127_g7159.t1

Description : Potassium channel KAT1 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001127.26
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre17.g706900 30782036, CNG3 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Dusal.0329s00009.1 33198134 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
SymbC1.scaffold1785.1 1785.1 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3638.5 3638.5 Potassium channel domain; Cyclic nucleotide-binding... 0.01 OrthoFinder
SymbC1.scaffold84.10 84.10 Cyclic nucleotide-binding domain; Ion transport domain... 0.03 OrthoFinder
TP05G05200.1 No alias EF-hand domain; Cyclic nucleotide-binding domain; Ion... 0.03 OrthoFinder
TP18G01730.1 No alias Hypothetical protein 0.02 OrthoFinder
Vocar.0082s0001.1 32886964 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
XM_002501236.1 MICPUN_52700, 52700 Voltage-gated ion channel superfamily 0.01 OrthoFinder
lcl|BLLF01000135.1_cds_GFH08070.1_2547 HaLaN_02975, GFH08070 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10809.1_5286 HaLaN_06192, GFH10809 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10810.1_5287 HaLaN_06193, GFH10810 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001221.1_cds_GFH17913.1_12390 HaLaN_14637, GFH17913 Cyclic nucleotide-binding domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499950.1_8903 KAA8499950 Potassium voltage-gated channel subfamily H member 7 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 96 341
IPR000595 cNMP-bd_dom 444 529
No external refs found!