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  5. Cz15g20050.t1

Cz15g20050.t1


Description : Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Biotin carboxylase-like, N-terminal domain; Biotin/lipoyl attachment; Biotin carboxylase, C-terminal [Interproscan].


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cz15g20050.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278098 30778609, MCC1 Amino acid metabolism.degradation.branched-chain amino... 0.05 OrthoFinder
PTI_03G04110.1 No alias Biotin/lipoyl attachment; Biotin carboxylase,... 0.02 OrthoFinder
Sro379_g130470.1 Contig3398.g26564 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 0.05 OrthoFinder
SymbC1.scaffold20482.1 20482.1 Carbamoyl-phosphate synthetase large subunit-like,... 0.01 OrthoFinder
SymbC1.scaffold25.83 25.83 Biotin/lipoyl attachment; Acetyl-CoA carboxylase;... 0.01 OrthoFinder
Transcript_contig_55755 55755 Biotin carboxylase, C-terminal; Propionyl-coenzyme A... 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 392 505
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 170 378
IPR000089 Biotin_lipoyl 667 730
IPR005481 BC-like_N 57 165
No external refs found!