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Description : HECT domain; E3 ubiquitin ligase, domain of unknown function DUF908; E3 ubiquitin ligase, domain of unknown function DUF913; HUWE1/Rev1, ubiquitin binding region; Ubiquitin-associated domain [Interproscan].
Gene families : OG_01_0000372 (OrthoFinder) Phylogenetic Tree(s): OG0000372_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz15g05050.t1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g012450 | 30788678 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder | |
| Cre12.g533750 | 30793184 | E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| PTI_09G01980.1 | No alias | HECT domain; E3 ubiquitin ligase, domain of unknown... | 0.03 | OrthoFinder | |
| Sro1025_g232790.1 | Contig568.g7230 | Probable E3 ubiquitin-protein ligase hulA | 0.01 | OrthoFinder | |
| Sro180_g078710.1 | Contig350.g4750 | Probable E3 ubiquitin-protein ligase hulA | 0.04 | OrthoFinder | |
| SymbC1.scaffold663.3 | 663.3 | Ankyrin repeat-containing domain [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0045s0037.1 | 32887770 | E3 ubiquitin ligase, domain of unknown function DUF913;... | 0.02 | OrthoFinder | |
| XM_002502841.1 | MICPUN_59359, 59359 | HUWE1/Rev1, ubiquitin binding region; E3 ubiquitin... | 0.03 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33532.1_3338 | PRW33532 | E3 ubiquitin-ligase UPL1-like | 0.04 | OrthoFinder | |
| lcl|LHPG02000023.1_cds_PRW20575.1_5413 | PRW20575 | E3 ubiquitin-ligase HUWE1 | 0.04 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8495039.1_3569 | KAA8495039 | E3 ubiquitin-protein ligase UPL2 | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Enrichment |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| MF | GO:0060090 | molecular adaptor activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000569 | HECT_dom | 4754 | 5062 |
| IPR010309 | E3_Ub_ligase_DUF908 | 79 | 359 |
| IPR025527 | HUWE1/Rev1_UBM | 3682 | 3709 |
| IPR025527 | HUWE1/Rev1_UBM | 3836 | 3865 |
| IPR025527 | HUWE1/Rev1_UBM | 3779 | 3812 |
| IPR010314 | E3_Ub_ligase_DUF913 | 466 | 801 |
| IPR010314 | E3_Ub_ligase_DUF913 | 924 | 1020 |
| IPR015940 | UBA | 1639 | 1675 |
| No external refs found! |