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  5. Cz12g14180.t1

Cz12g14180.t1


Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g14180.t1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cre05.g241350 30783120 ABC transporter G family member 28 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g527100 30793034 ABC transporter G family member 28 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g29200.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz02g11190.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Cz03g01010.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Cz09g11220.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Cz11g07110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
EOD28242 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro604_g174070.1 Contig2463.g20161 Putative white-brown complex homolog protein 30 0.03 OrthoFinder
Transcript_contig_61805 61805 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 442 652
IPR003439 ABC_transporter-like_ATP-bd 141 289
No external refs found!