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  5. Cz12g10090.t1

Cz12g10090.t1


Description : Cytidylyltransferase IspD/TarI [Interproscan].


Gene families : OG_01_0002848 (OrthoFinder) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g10090.t1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
EOD24324 No alias Cytidylyltransferase IspD/TarI [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498820.1_7773 KAA8498820 2-C-methyl-D-erythritol 4-phosphate... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0070567 cytidylyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR034683 IspD/TarI 3 187
No external refs found!