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  5. Cz12g08060.t1

Cz12g08060.t1


Description : PTHB1, C-terminal domain; PTHB1, N-terminal domain [Interproscan].


Gene families : OG_01_0006286 (OrthoFinder) Phylogenetic Tree(s): OG0006286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g08060.t1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cre04.g219700 30791143, BBS9 No description available 0.02 OrthoFinder
EOD33941 No alias PTHB1, C-terminal domain; PTHB1, N-terminal domain... 0.01 OrthoFinder
Vocar.0025s0100.1 32898414 PTHB1, N-terminal domain; PTHB1, C-terminal domain... 0.03 OrthoFinder
lcl|BLLF01000639.1_cds_GFH13671.1_8148 HaLaN_09604, GFH13671 Bardet-biedl syndrome 9 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR028073 PHTB1_N_dom 13 346
IPR028074 PHTB1_C_dom 390 778
No external refs found!