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  5. Cpa|evm.model.tig00001086.22

Cpa|evm.model.tig00001086.22 (tig00001086_g6856.t1)


Aliases : tig00001086_g6856.t1

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component


Gene families : OG_01_0002646 (OrthoFinder) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001086.22
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2106.6 2106.6 Vacuolar protein sorting-associated protein 35 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0933.1 32884571 Vacuolar protein sorting-associated protein 35 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0030906 retromer, cargo-selective complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005378 Vps35 19 740
No external refs found!