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  5. Cz12g01140.t1

Cz12g01140.t1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g01140.t1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.5 tig00000402_g179.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
PTI_14G02520.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
PTI_14G02930.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.03 OrthoFinder
SymbC1.scaffold449.5 449.5 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP02G01330.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP05G03820.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
TP22G02510.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_002499986.1 MICPUN_56207, 56207 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002501833.1 MICPUN_108141, 108141 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001468.1_cds_GFH19468.1_13945 HaLaN_16418, GFH19468 RING-type domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492818.1_2554 KAA8492818 RING finger protein 24 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 209 251
No external refs found!