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  5. Cpa|evm.model.tig00001085.33

Cpa|evm.model.tig00001085.33 (tig00001085_g6970.t1)


Aliases : tig00001085_g6970.t1

Description : Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001085.33
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cre03.g168050 30787600 Transcription factor GTE1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre08.g367300 30773991 Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz09g02040.t1 No alias Bromodomain; Methyl-CpG DNA binding [Interproscan]. 0.02 OrthoFinder
Dusal.0083s00007.1 33186069 Bromodomain; NET domain [Interproscan]. 0.03 OrthoFinder
EOD17659 No alias Bromodomain [Interproscan]. 0.02 OrthoFinder
OT_01G02940.1 No alias Bromodomain [Interproscan]. 0.02 OrthoFinder
OT_07G00520.1 No alias Bromodomain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001787.1_cds_GFH21240.1_15717 HaLaN_18501, GFH21240 NET domain; Bromodomain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR000182 GNAT_dom 273 329
IPR001487 Bromodomain 390 470
No external refs found!