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  5. Cz11g28030.t1

Cz11g28030.t1


Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain; Peptidase M41 [Interproscan].


Gene families : OG_01_0001590 (OrthoFinder) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz11g28030.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cre13.g568400 30784443, FHL4 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder
Dusal.0477s00008.1 33196079 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
Dusal.0894s00002.1 33187821 ATPase, AAA-type, core; Peptidase M41 [Interproscan]. 0.02 OrthoFinder
PTI_24G01080.1 No alias ATPase, AAA-type, core; Peptidase M41 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_67544 67544 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
Vocar.0001s1639.1 32884324 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.03 OrthoFinder
XM_002503754.1 MICPUN_59768, 59768 Peptidase M41; ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
XM_002508578.1 MICPUN_95367, 95367 AAA ATPase, AAA+ lid domain; Peptidase M41; ATPase,... 0.02 OrthoFinder
XM_003055101.1 MicpuC2_46348, 46348 ATPase, AAA-type, core; Peptidase M41 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491434.1_6244 KAA8491434 ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 432 474
IPR003959 ATPase_AAA_core 279 408
IPR000642 Peptidase_M41 490 669
No external refs found!