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  5. Cz10g19230.t1

Cz10g19230.t1


Description : ATP-cone domain; Ribonucleotide reductase large subunit, N-terminal; Ribonucleotide reductase large subunit, C-terminal [Interproscan].


Gene families : OG_01_0001485 (OrthoFinder) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g19230.t1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.1 tig00001042_g6579.t1 Ribonucleoside-diphosphate reductase large subunit... 0.02 OrthoFinder
Cre12.g492950 30792262, RIR1 Nucleotide metabolism.deoxynucleotide... 0.03 OrthoFinder
Dusal.0285s00017.1 33192879 Ribonucleotide reductase large subunit, C-terminal;... 0.09 OrthoFinder
EOD13106 No alias Ribonucleotide reductase large subunit, C-terminal... 0.04 OrthoFinder
OT_01G00090.1 No alias Ribonucleotide reductase large subunit, C-terminal;... 0.06 OrthoFinder
PTI_01G04160.1 No alias Ribonucleotide reductase large subunit, C-terminal;... 0.05 OrthoFinder
Sro399_g134840.1 Contig279.g3611 Ribonucleoside-diphosphate reductase large 0.03 OrthoFinder
TP04G01330.1 No alias Ribonucleotide reductase large subunit, N-terminal;... 0.03 OrthoFinder
Transcript_contig_53771 53771 Ribonucleotide reductase large subunit, C-terminal;... 0.02 OrthoFinder
Vocar.0031s0085.1 32890180 ATP-cone domain; Ribonucleotide reductase large subunit,... 0.07 OrthoFinder
XM_002507347.1 MICPUN_93299, 93299 Ribonucleoside-diphosphate reductase 0.02 OrthoFinder
lcl|BLLF01000014.1_cds_GFH05936.1_413 HaLaN_00482, GFH05936 Ribonucleoside-diphosphate reductase 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20647.1_5257 PRW20647 Ribonucleoside-diphosphate reductase large subunit 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496054.1_2052 KAA8496054 Ribonucleoside-diphosphate reductase large subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR005144 ATP-cone_dom 3 91
IPR013509 RNR_lsu_N 144 214
IPR000788 RNR_lg_C 218 760
No external refs found!