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  5. Cz10g17230.t1

Cz10g17230.t1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g17230.t1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre02.g103250 30785465, MRP5 Solute transport.primary active transport.ABC... 0.04 OrthoFinder
Cre03.g174050 30787660, MRP4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre04.g228650 30791460 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cz03g28180.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Dusal.0852s00003.1 33185426 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Vocar.0015s0182.1 32898823 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
lcl|BLLF01000878.1_cds_GFH15644.1_10121 HaLaN_11905, GFH15644 ABC transporter 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56046.1_9960 PRW56046 Multidrug resistance-associated 1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1082 1230
IPR003439 ABC_transporter-like_ATP-bd 404 537
IPR011527 ABC1_TM_dom 64 339
IPR011527 ABC1_TM_dom 758 1017
No external refs found!