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  5. Cz10g12160.t1

Cz10g12160.t1


Description : SAC3/GANP/THP3 [Interproscan].


Gene families : OG_01_0002402 (OrthoFinder) Phylogenetic Tree(s): OG0002402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g12160.t1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
EOD28081 No alias SAC3/GANP/THP3 [Interproscan]. 0.01 OrthoFinder
OT_01G03490.1 No alias SAC3/GANP/THP3 [Interproscan]. 0.02 OrthoFinder
PTI_02G05540.1 No alias SAC3/GANP/THP3 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3_conserved 593 731
IPR005062 SAC3/GANP/THP3_conserved 780 947
No external refs found!