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  5. Cz09g17270.t1

Cz09g17270.t1


Description : DNA polymerase III, delta subunit [Interproscan].


Gene families : OG_01_0002126 (OrthoFinder) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g17270.t1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.48 tig00000704_g3335.t1 Cell cycle.interphase.DNA... 0.02 OrthoFinder
Cre16.g679950 30777561, RFC3 Cell cycle.interphase.DNA... 0.02 OrthoFinder
Dusal.0195s00008.1 33196562 Rad17 P-loop domain [Interproscan]. 0.02 OrthoFinder
OT_05G00160.1 No alias DNA polymerase III, delta subunit [Interproscan]. 0.04 OrthoFinder
Sro142_g066280.1 Contig226.g2677 Factor C subunit 3 0.04 OrthoFinder
TP03G06070.1 No alias Replication factor C, C-terminal; DNA polymerase III,... 0.02 OrthoFinder
Vocar.0018s0128.1 32898522 DNA polymerase III, delta subunit [Interproscan]. 0.03 OrthoFinder
XM_002504091.1 MICPUN_61038, 61038 DNA polymerase III, delta subunit [Interproscan]. 0.04 OrthoFinder
XM_003060179.1 MicpuC2_18270, 18270 DNA polymerase III, delta subunit [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000192.1_cds_GFH08891.1_3368 HaLaN_03931, GFH08891 AAA domain-containing protein 0.03 OrthoFinder
lcl|BLLF01002740.1_cds_GFH25172.1_19649 HaLaN_23096, GFH25172 AAA domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0018196 peptidyl-asparagine modification IEP Enrichment
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!