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  5. Cz09g03300.t1

Cz09g03300.t1


Description : Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0007024 (OrthoFinder) Phylogenetic Tree(s): OG0007024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g03300.t1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.179 tig00000042_g15583.t1 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii 0.01 OrthoFinder
Cre11.g467616 30775497 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii 0.06 OrthoFinder
Vocar.0009s0228.1 32893386 Anaphase-promoting complex, cyclosome, subunit 3 [Interproscan]. 0.04 OrthoFinder
XM_003058491.1 MicpuC2_58162, 58162 Anaphase-promoting complex, cyclosome, subunit 3 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!