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  5. Cz09g01110.t1

Cz09g01110.t1


Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0001188 (OrthoFinder) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g01110.t1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.2 tig00000615_g2527.t1 No description available 0.02 OrthoFinder
Cre01.g044850 30788853 No description available 0.02 OrthoFinder
EOD29932 No alias Coagulation factor 5/8 C-terminal domain [Interproscan]. 0.03 OrthoFinder
XM_002509257.1 MICPUN_103424, 103424 U box domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!