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  5. Cpa|evm.model.tig00000093.243

Cpa|evm.model.tig00000093.243 (tig00000093_g3665.t1)


Aliases : tig00000093_g3665.t1

Description : Protein NAR1 OS=Arabidopsis thaliana


Gene families : OG_01_0001200 (OrthoFinder) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000093.243
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cre03.g199800 30787320, HYDA1 Protein NAR1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Transcript_contig_57710 57710 Iron hydrogenase, large subunit, C-terminal [Interproscan]. 0.01 OrthoFinder
XM_003062518.1 MicpuC2_2829, 2829 Iron hydrogenase, large subunit, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498275.1_7228 KAA8498275 Cytosolic Fe-S cluster assembly factor NARFL 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR004108 Fe_hydrogenase_lsu_C 1741 2039
IPR004108 Fe_hydrogenase_lsu_C 2146 2444
IPR003149 Fe_hydrogenase_ssu 320 371
IPR003149 Fe_hydrogenase_ssu 1604 1655
IPR003149 Fe_hydrogenase_ssu 2048 2099
IPR003149 Fe_hydrogenase_ssu 2453 2504
IPR003149 Fe_hydrogenase_ssu 1160 1211
IPR003149 Fe_hydrogenase_ssu 734 785
IPR004108 Fe_hydrogenase_lsu_C 1297 1595
IPR004108 Fe_hydrogenase_lsu_C 33 311
IPR008254 Flavodoxin/NO_synth 2617 2753
IPR008254 Flavodoxin/NO_synth 2809 2948
IPR004108 Fe_hydrogenase_lsu_C 855 1151
IPR004108 Fe_hydrogenase_lsu_C 427 725
No external refs found!