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  5. Cz08g27170.t1

Cz08g27170.t1


Description : Down-regulated-in-metastasis protein [Interproscan].


Gene families : OG_01_0001809 (OrthoFinder) Phylogenetic Tree(s): OG0001809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g27170.t1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000137.1 tig00000137_g8129.t1 No description available 0.11 OrthoFinder
Cre10.g461000 30790498 No description available 0.2 OrthoFinder
Dusal.0102s00005.1 33190548 Down-regulated-in-metastasis protein [Interproscan]. 0.02 OrthoFinder
EOD12395 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD12441 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.16 OrthoFinder
OT_02G00990.1 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.02 OrthoFinder
PTI_02G02570.1 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.16 OrthoFinder
Sro215_g088910.1 Contig4439.g33315 Processome component 20 homolog 0.19 OrthoFinder
TP03G02840.1 No alias Hypothetical protein 0.08 OrthoFinder
Vocar.0029s0011.1 32887305 Down-regulated-in-metastasis protein [Interproscan]. 0.06 OrthoFinder
XM_002504194.1 MICPUN_107415, 107415 Hypothetical protein (UTP20) 0.02 OrthoFinder
XM_003060074.1 MicpuC2_59558, 59558 Hypothetical protein 0.04 OrthoFinder
XM_003060075.1 MicpuC2_65507, 65507 Down-regulated-in-metastasis protein [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001450.1_cds_GFH19363.1_13840 HaLaN_16300, GFH19363 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01002248.1_cds_GFH23331.1_17808 HaLaN_20930, GFH23331 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01002248.1_cds_GFH23332.1_17809 HaLaN_20931, GFH23332 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01002248.1_cds_GFH23333.1_17810 HaLaN_20932, GFH23333 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01005297.1_cds_GFH31022.1_25499 HaLaN_29971, GFH31022 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01005297.1_cds_GFH31023.1_25500 HaLaN_29972, GFH31023 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58885.1_7285 PRW58885 Small subunit processome component 20-like protein 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498948.1_7901 KAA8498948 U3 small nucleolar RNA-associated protein 20 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR011430 DRIM 1386 1928
IPR011430 DRIM 1164 1330
No external refs found!