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  5. Cpa|evm.model.tig00001042.22

Cpa|evm.model.tig00001042.22 (tig00001042_g6595.t1)


Aliases : tig00001042_g6595.t1

No description available


Gene families : OG_01_0000093 (OrthoFinder) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001042.22
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000444.14 tig00000444_g805.t1 RNA biosynthesis.transcriptional activation.NIN-like... 0.04 OrthoFinder
Cpa|evm.model.tig00000743.27 tig00000743_g3876.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000881.30 tig00000881_g5245.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020556.93 tig00020556_g11059.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021168.5 tig00021168_g19071.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021254.1 tig00021254_g19675.t1 RNA biosynthesis.transcriptional activation.NIN-like... 0.02 OrthoFinder
Cz11g29090.t1 No alias RWP-RK domain [Interproscan]. 0.02 OrthoFinder
XM_003057336.1 MicpuC2_46781, 46781 RWP-RK domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003564.1_cds_GFH27656.1_22133 HaLaN_26018, GFH27656 RWP-RK domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 1179 1226
IPR001293 Znf_TRAF 91 142
No external refs found!