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  5. Cz08g09230.t1

Cz08g09230.t1


Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g09230.t1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cz08g09240.t1 No alias Ion transport domain; Voltage-dependent L-type calcium... 0.03 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.07 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_18G00730.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002508078.1 MICPUN_105920, 105920 Voltage-gated ion channel superfamily (CAV2) 0.02 OrthoFinder
XM_003062221.1 MicpuC2_21063, 21063 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11379.1_5856 HaLaN_06866, GFH11379 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000792.1_cds_GFH14993.1_9470 HaLaN_11140, GFH14993 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 380 654
No external refs found!