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Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz08g00120.t1 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g320400 | 30774456 | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder | |
| Cre07.g320450 | 30775051 | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder | |
| Cre08.g384650 | 30773689 | Photosynthesis.photophosphorylation.photosystem... | 0.13 | OrthoFinder | |
| Cre09.g394325 | 30780217, ELI3 | Photosynthesis.photophosphorylation.photosystem... | 0.1 | OrthoFinder | |
| Cre14.g626750 | 30776408 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre16.g679250 | 30778123, ELI1 | Photosynthesis.photophosphorylation.photosystem... | 0.1 | OrthoFinder | |
| Dusal.0172s00023.1 | 33188490 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0419s00012.1 | 33196978 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| OT_04G01820.1 | No alias | FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_13G02960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_55820 | 55820 | Hypothetical protein | 0.07 | OrthoFinder | |
| Transcript_contig_78826 | 78826 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0001s0155.1 | 32884709 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0006s0022.1 | 32894246 | Chlorophyll A-B binding protein [Interproscan]. | 0.07 | OrthoFinder | |
| XM_002505237.1 | MICPUN_62633, 62633 | Early light induced protein-like 3, chloroplast... | 0.03 | OrthoFinder | |
| XM_002506082.1 | MICPUN_63993, 63993 | Early light induced protein-like protein, chloroplast... | 0.02 | OrthoFinder | |
| lcl|BLLF01000380.1_cds_GFH11164.1_5641 | HaLaN_06615, GFH11164 | Chloroplast carotene biosynthesis related protein | 0.06 | OrthoFinder | |
| lcl|BLLF01000628.1_cds_GFH13571.1_8048 | HaLaN_09486, GFH13571 | Carotene biosynthesis-related protein | 0.07 | OrthoFinder | |
| lcl|BLLF01001239.1_cds_GFH18033.1_12510 | HaLaN_14768, GFH18033 | Chloroplast carotene biosynthesis related protein | 0.07 | OrthoFinder | |
| lcl|BLLF01001239.1_cds_GFH18034.1_12511 | HaLaN_14769, GFH18034 | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| lcl|BLLF01002554.1_cds_GFH24512.1_18989 | HaLaN_22321, GFH24512 | Desiccation stress protein DSP-22, chloroplastic | 0.05 | OrthoFinder | |
| lcl|VRMN01000007.1_cds_KAA8493242.1_9543 | KAA8493242 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008202 | steroid metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| BP | GO:0016125 | sterol metabolic process | IEP | Enrichment |
| BP | GO:0016126 | sterol biosynthetic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 87 | 139 |
| No external refs found! |