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  5. Cz07g32170.t1

Cz07g32170.t1


Description : ABC-transporter extension domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g32170.t1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre01.g034950 30788752 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.0100s00016.1 33202465 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Dusal.0335s00016.1 33196473 ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Dusal.1033s00003.1 33195065 ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
EOD04357 No alias ABC transporter protein [Ensembl]. 0.03 OrthoFinder
EOD07705 No alias ABC transporter protein [Ensembl]. 0.04 OrthoFinder
EOD41782 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_05G02420.1 No alias ABC-transporter extension domain; ABC transporter-like;... 0.03 OrthoFinder
OT_07G01740.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Sro365_g127370.1 Contig3612.g27911 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
XM_002502487.1 MICPUN_58625, 58625 ABC-transporter extension domain; ZC3H15/TMA46 family,... 0.03 OrthoFinder
XM_002503388.1 MICPUN_83355, 83355 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002505024.1 MICPUN_98118, 98118 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003055665.1 MicpuC2_50666, 50666 ABC transporter/cobalt transport family protein 0.02 OrthoFinder
XM_003057335.1 MicpuC2_70921, 70921 Zinc finger/ABC transporter fusion protein 0.02 OrthoFinder
XM_003060298.1 MicpuC2_60050, 60050 ABC transporter 0.02 OrthoFinder
lcl|BLLF01000100.1_cds_GFH07516.1_1993 HaLaN_02328, GFH07516 ABC transporter-like [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 90 248
IPR003439 ABC_transporter-like_ATP-bd 404 534
IPR032781 ABC_tran_Xtn 287 359
No external refs found!